Datasets
Welcome to the Datasets page!
We are currently testing this feature and welcome your input.
Here you can query phenotype data by strain, investigator, experiment, experimental condition, and assay. You can filter by sex for selected strains. For selected assays and conditions, you can specify bounded or unbounded ranges of values. AMDCC investigators and their lab members can save criteria for later review.
Click
Add Group
to start new criteria group (indicated by =======OR======== in the display). When you specify more than one group of criteria, you are searching for data that matches all the criteria in group 1 OR all the criteria in group 2, and so on for each group. Within a group, criteria from the same category are ORed together (for example, including Strains 129.A and C57BL6 in the same group will find data for both strains).
NOTE: The selection lists for strains, assays, and experiments show those items that have associated data,
some of which may not be publicly available
. Public users may not not get any results even with minimally restrictive criteria.
Select an existing dataset
[None Selected]
McIndoe: Baseline Phenotyping
McIndoe: Cardiovascular Phenotyping
McIndoe: Nephropathy Phenotyping
DATASET CRITERIA
Animal age units
day(s) post-natal
week(s) post-natal
month(s) post-natal
year(s) post-natal
Include
Exclude
Strain
Investigator
Experiment
Assay
Condition
129S/SvEv
129S6/SvEv
129X1/SvJ
A/J
B6.129S7-Ldlr<tm1Her> /J
B6.Cg(SJL)-TgN(Nes-cre)1Kln
B6;129S7-Fyn<tm1Sor>
B6SJL-TgN(Myl2SLC2A1)2Mue
BALB/cJ
BKS.Cq-m Lepr<db>/+ +
C57BL/6
C57BL/6-Ipf1 <+/->
C57BL/6J
C57BL/6J-Ins2<Akita>
C57BL/6J-Lepr<db>
C57BL/6J-Slc2a4<tm1Cha>
C57BL/6J-Tg(SLC2A4)
C57BLKS/J
C57BLKS/J-Lepr<db/db>
C57BLKS/J-Lepr<db/m>
CAST/Ei
CD1
DBA/2J
FH/IS
FVB-Ldlr<-/->
FVB.BKS(D)-+/?/ChuaJ
FVB.BKS(D)-Lepr <db>/ChuaJ
FVB/NJ
KK/HlJ
MRL/MpJ
NON/LtJ
Swiss Webster
Sex
M+F
M
F
[Leiter] Baseline Metabolic Phenotyping for AMDCC Mouse Strains
Abel, E. Dale
Bottinger, Erwin
Breyer, Matthew
Brosius, Frank
Charron, Maureen
Coffman, Thomas
Daneshgari, Firouz
Dansky, Hayes
Feldman, Eva
Fisher, Edward
Goldberg, Ira
Harris, Raymond
Heilig, Charles
Hunter-Schaedle, Kim
Kretzler, Matthias
Leiter, Ed
Levi, Moshe
Maeda, Nobuyo
McIndoe, Richard
Sharma, Kumar
Smithies, Oliver
Takahashi, Takamune
alanine amino transferase
alkaline phosphatase
AMPK Activity
aortic arch (cross section) lesion area
Aortic Atherosclerosis Morphometry - Intimal Area
Aortic Atherosclerosis Morphometry - Intimal Area as % Medial Area
Aortic Atherosclerosis Morphometry - Medial Area
aortic flow 00 minutes
aortic flow 20 minutes
aortic flow 40 minutes
aortic flow 60 minutes
aortic sinus (cross section) lesion area
aortic surface area section A
aortic surface area section B
aortic surface area section C
arterial blood glucose
arterial clamp plasma NEFA
arterial clamp plasma non-esterified fatty acids
arterial hematocrit
arterial insulin
arterial NEFA
arterial plasma corticosterone
arterial plasma epinephrine
arterial plasma glucagon
arterial plasma insulin
arterial plasma NEFA
arterial plasma norepinephrine
aspartate amino transferase
average clamp glucose
average glucose infusion rate
basal glucose
basal HGP
basal insulin
blood glucose
blood insulin
blood pressure: developed
blood pressure: developed 00 minutes
blood pressure: developed 20 minutes
blood pressure: developed 40 minutes
blood pressure: developed 60 minutes
blood pressure: diastole
blood pressure: diastole 00 minutes
blood pressure: diastole 20 minutes
blood pressure: diastole 40 minutes
blood pressure: diastole 60 minutes
blood pressure: systole
blood pressure: systole 00 minutes
blood pressure: systole 20 minutes
blood pressure: systole 40 minutes
blood pressure: systole 60 minutes
blood urea nitrogen
body length A/N (rodent)
body weight (pig)
body weight (rodent)
bone area
bone mineral content
bone mineral density
brain glucose metabolic index
Brain Kg
brain weight (rodent)
BUN/Creatinine Ratio
C16:0 CoA ester
C16:1 CoA ester
C18:0 CoA ester
C18:1 CoA ester
C18:2 CoA ester
C18:3 CoA ester
cardiac efficiency
cardiac efficiency 00 minutes
cardiac efficiency 20 minutes
cardiac efficiency 40 minutes
cardiac efficiency 60 minutes
cardiac output
cardiac power 00 minutes
cardiac power 20 minutes
cardiac power 40 minutes
cardiac power 60 minutes
Circumflex Coronary Artery Atherosclerosis Morphometry - Intimal Area
Circumflex Coronary Artery Atherosclerosis Morphometry - Intimal Area as % Medial Area
Circumflex Coronary Artery Atherosclerosis Morphometry - Medial Area
Circumflex Coronary Artery Atherosclerosis Morphometry - Percent Stenosis
Clamp Glucose
Clamp HGP
coronary flow
coronary flow 00 minutes
coronary flow 20 minutes
coronary flow 40 minutes
coronary flow 60 minutes
coronary flow/heart weight
diaphragm glucose metabolic index
diaphragm Kg
dry heart weight
EE 30 min exercise
EE basal
EE exhaustion
EE max
ejection fraction
en face abdominal aorta lesion area
en face abdominal aorta lesion area %
En Face Abdominal Aorta Lesion Area (Pig)
En Face Abdominal Aorta Lesion Percent (Pig)
en face abdominal aorta total area
En Face Abdominal Aorta Total Area (Pig)
en face aortic arch lesion area
en face aortic arch lesion area %
en face aortic arch total area
en face thoracic aorta lesion area
en face thoracic aorta lesion area %
en face thoracic aorta total area
endo RA
endurance time
experimental insulin
fasting glucose
fasting insulin
fat body mass
fatty streaks/total lesion ratio
food intake
fractional shortening
free water
Frequently sampled intravenous glucose tolerance test - Glucose Conc.
Frequently sampled intravenous glucose tolerance test - Insulin Conc.
gastrocnemius glucose metabolic index
gastrocnemius glycogen
gastrocnemius Kg
GFR inulin clearance (FITC-inulin IV bolus injection)
glucose infusion rate
glucose oxidation 00-20 minutes
glucose oxidation 20-40 minutes
glucose oxidation 40-60 minutes
Glucose Uptake
glutamine dehydrogenase
glycogen synthesis
glycolysis
glycolysis 00-20 minutes
glycolysis 20-40 minutes
glycolysis 40-60 minutes
glycosylated hemoglobin
HCT
heart glucose metabolic index
heart glycogen
heart Kg
heart rate
heart weight:tibia length ratio
heart:body weight ratio
hematocrit
hemoglobin
high-density lipoprotein cholesterol
insulin dose
interventricular septal diameter diastole
intraperitoneal glucose tolerance test: 000min (baseline)
intraperitoneal glucose tolerance test: 005min post-injection
intraperitoneal glucose tolerance test: 015min post-injection
intraperitoneal glucose tolerance test: 030min post-injection
intraperitoneal glucose tolerance test: 060min post-injection
intraperitoneal glucose tolerance test: 120min post-injection
KG brain
KG dia
KG gas
KG heart
KG sol
KG vas
kidney weight:tibia length ratio
lean body mass
Left Anterior Descending Coronary Artery Morphometry - Intimal Area
Left Anterior Descending Coronary Artery Morphometry - Intimal Area as % Medial Area
Left Anterior Descending Coronary Artery Morphometry - Medial Area
Left Anterior Descending Coronary Artery Morphometry - Percent Stenosis
left kidney weight (mouse)
Left Ventricle End Diastolic Pressure
left ventricular diameter diastolic
left ventricular diameter systolic
left ventricular ejection fraction
left ventricular mass
left ventricular outflow index
left ventricular posterior wall diameter in diastole
left ventricular systolic pressure
leptin
lesion area aortic section A
lesion area aortic section C
Lesion Complexity Index
lesion surface area section b
liver weight
liver weight:tibia length ratio
liver:body weight ratio
low-density lipoprotein cholesterol
LV internal diameter end-diastole
LV internal diameter end-systole
LV mass
LV posterior wall thickness end-diastole
LV posterior wall thickness end-systole
LV septal wall thickness end-diastole
LV septal wall thickness end-systole
mean brachiocephalic artery lesion size
mean cell volume
mean corpuscular hemoglobin
mean corpuscular hemoglobin concentration
mean platelet volume
mesangial index
myocardial oxygen consumption
myocardial oxygen consumption 00 minutes
myocardial oxygen consumption 20 minutes
myocardial oxygen consumption 40 minutes
myocardial oxygen consumption 60 minutes
negative pressure change/time
non-esterified free fatty acids
oral glucose tolerance
osmolality (Calculated)
palmitate oxidation 00-20 minutes
palmitate oxidation 20-40 minutes
palmitate oxidation 40-60 minutes
percent body fat (rodent)
percent of aortic surface covered by lesion
plantar hind paw analgesia test
plasma free fatty acids
plasma glucose
plasma hepatic lipase activity
plasma insulin
plasma triglycerides
plasma unesterified cholesterol
platelet count
positive pressure change/time
Post-op body weight (Rodent)
Pre-op body weight (Rodent)
pressure change/time maximum
pressure change/time minimum
pulse
RA
Rat Pressure Product (Developed Pressure time HR)
Rd
red blood cell count
Respiratory Control
RG brain
RG dia
RG gas
RG heart
RG sol
RG vas
Right Coronary Artery Atherosclerosis Morphometry - Intimal Area
Right Coronary Artery Atherosclerosis Morphometry - Intimal Area as % Medial Area
Right Coronary Artery Atherosclerosis Morphometry - Medial Area
Right Coronary Artery Atherosclerosis Morphometry - Percent Stenosis
right kidney weight (mouse)
RR systolic
sciatic motor conduction velocity
serium insulin: 000min (baseline)
serium insulin: 030min (post injection)
serum albumin
serum albumin to globulin ratio
serum amylase
serum calcium
serum chloride
serum creatine phosphokinase
serum creatinine
serum gamma glutamyl transpeptidase
serum globulin
serum lactic dehydrogenase
serum lipase
serum magnesium
serum phosphorus
serum potassium
serum sodium
serum total bilirubin
serum total protein
serum triglycerides
soleus glucose metabolic index
soleus Kg
spleen weight
spleen weight:tibia length ratio
spleen:body weight ratio
subcutaneous fat pad weight
superficial vastus lateralis glycogen
SVL glucose metabolic index
SVL Kg
tail flick analgesia test
tail motor latency
tail sensory conduction velocity
tibia length (mouse)
total albumin excretion
total aortic surface area
total body weight
total cholesterol
total creatinine excretion
total kidney weight (mouse)
total kidney:body weight ratio
total lesion area on the aorta
triglycerides
urine albumin (Exocell Albulwell M ELISA)
urine albumin/urine creatinine ratio
urine creatinine (Exocell Picric Acid method)
VCO2 30 Min Exercise
VCO2 basal
VCO2 exhaustion
VCO2 max
very-low density lipoprotein cholesterol
VO2 30 min exercise
VO2 basal
VO2 Exhaustion
VO2 max
wet heart weight (mouse)
white blood cell count
whole body glucose turnover
whole body glycogen/lipid synthesis
whole body glycolysis
Work Duration
WR max
with values from
>
>=
to
<
<=
age at start of diet (month)
age at start of diet (week)
Angiotensin II dose (milligrams per kilogram per minute)
calcium concentration (millimole)
Duration of Banding (week)
duration of treatment (day)
fast duration (hour)
Fasted
Fasted 2 (hour)
Fun Stuff
glucose concentration (millimole)
glucose dose (milligrams per kilogram)
glucose infusion rate (milligrams per kilogram per minute)
glutamate concentration (millimole)
Insulin
insulin concentration (nanomole)
insulin dose (miliUnits per kilogram)
insulin dose 2 (milligrams per kilogram per minute)
IP glucose dose (milligrams per kilogram)
IP STZ dosage plan
IP STZ dose (milligrams per kilogram)
isoproterenol treatment/delivery (milligrams per kilogram per minute)
malate concentration (millimole)
monoclonal antibody antagonists (human)
monoclonal antibody antagonists (human)'
mouse diet
mouse diet
palmitate concentration (millimole)
palmitoyl carnitine concentration (millimole)
pig diet
pyruvate concentration (millimole)
Surgery Performed
time sample taken (minute)
time since baseline (day)
time since baseline (minute)
time since baseline (week)
time since start of diet (week)
time since start of study (month)
time since surgery (day)
time since surgery 2 (day)
time since Type 1 Diabetes onset (day)
time since Type 1 Diabetes onset (week)
tissue section number for assesment
Tissue Source
total time on diet (month)
total time on diet (week)
treatment
wheel running (day)
=
<>
>
>=
<
<=
Main
|
Data Search
|
Data Analysis
|
About AMDCC
|
Contact
|
Member Login
© 2007 Medical College of Georgia. All Rights Reserved.